Protein ZmABI24
ZmABI24 is a protein in the ABI3-VP1 family.
Information
TF Name: ZmABI24
Species: Maize
TF Family: ABI3-VP1
Gene Name(Synonym): ABI24
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmABI24

ZmABI24 is a protein in the ABI3-VP1 family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF02362
Zm00001eb051350_T002
Zm00001eb051340_T001
Zm00001eb051340_T002
Zm00001eb051350_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d033314DAPseq no logo sequence fimo position
Zm00001d033314DAPseq no logo sequence fimo position
Zm00001d033314ChIPseq no logo sequence fimo position
Zm00001d033314PChIPseq no logo sequence fimo position

Interactions where ZmABI24 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmABI24 is the target  
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There are 36 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb051350_T002 from maize genome v5

Amino Acid Sequence
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MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLPSEARKIINNYKIILTSSDAKVIPVKFAKNFRGKIERSIT
LESLGGCTFDVQVAQNLGRIVFQSGWESFVSAHDLKMCDLLVFKYDGMSRMKVLVFDPSGCEKVPPFFVTKNAMSGGRKR
EGPLDISSSDANLPMKTPETKKKAWKQRDRSRISIRSSRSLSSSSGGMTASEDDEAHSVPSYVLPRHTSLDTMQKRKVKE
RLQAICSEIPIYVLVVKNTNISGRSRAMVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQF
ARDNYLQLGDICLFEPLKTKKCTMNVHIIRKKE

MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLPSEARKIINNYKIILTSSDAKVIPVKFAKNFRGKIERSIT
LESLGGCTFDVQVAQNLGRIVFQSGWESFVSAHDLKMCDLLVFKYDGMSRMKVLVFDPSGCEKVPPFFVTKNAMSGGRKR
EGPLDISSSDANLPMKTPETKKKAWKQRDRSRISIRSSRSLSSSSGGMTASEDDEAHSVPSYVLPRHTSLDTMQKRKVKE
RLQAICSEIPIYVLVVKNTNISGRSRAMVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQF
ARDNYLQLGDICLFEPLKTKKCTMNVHIIRKKE

MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLPSEARKIINNYKIILTSSDAKVIPVKFAKNFRGKIERSIT
LESLGGCTFDVQVAQNLGRIVFQSGWESFVSAHDLKMCDLLVFKYDGMSRMKVLVFDPSGCEKVPPFFVTKNAMSGGRKR
EGPLDISSSDANLPMKTPETKKKAWKQRDRSRISIRSSRSLSSSSGGMTASEDDEAHSVPSYVLPRHTSLDTMQKRKVKE
RLQAICSEIPIYVLVVKNTNISGRSRAMVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQF
ARDNYLQLGDICLFEPLKTKKCTMNVHIIRKKE

MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLPSEARKIINNYKIILTSSDAKVIPVKFAKNFRGKIERSIT
LESLGGCTFDVQVAQNLGRIVFQSGWESFVSAHDLKMCDLLVFKYDGMSRMKVLVFDPSGCEKVPPFFVTKNAMSGGRKR
EGPLDISSSDANLPMKTPETKKKAWKQRDRSRISIRSSRSLSSSSGGMTASEDDEAHSVPSYVLPRHTSLDTMQKRKVKE
RLQAICSEIPIYVLVVKNTNISGRSRAMVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQF
ARDNYLQLGDICLFEPLKTKKCTMNVHIIRKKE

MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLPSEARKIINNYKIILTSSDAKVIPVKFAKNFRGKIERSIT
LESLGGCTFDVQVAQNLGRIVFQSGWESFVSAHDLKMCDLLVFKYDGMSRMKVLVFDPSGCEKVPPFFVTKNAMSGGRKR
EGPLDISSSDANLPMKTPETKKKAWKQRDRSRISIRSSRSLSSSSGGMTASEDDEAHSVPSYVLPRHTSLDTMQKRKVKE
RLQAICSEIPIYVLVVKNTNISGRSRAMVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQF
ARDNYLQLGDICLFEPLKTKKCTMNVHIIRKKE

MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLPSEARKIINNYKIILTSSDAKVIPVKFAKNFRGKIERSIT
LESLGGCTFDVQVAQNLGRIVFQSGWESFVSAHDLKMCDLLVFKYDGMSRMKVLVFDPSGCEKVPPFFVTKNAMSGGRKR
EGPLDISSSDANLPMKTPETKKKAWKQRDRSRISIRSSRSLSSSSGGMTASEDDEAHSVPSYVLPRHTSLDTMQKRKVKE
RLQAICSEIPIYVLVVKNTNISGRSRAMVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQF
ARDNYLQLGDICLFEPLKTKKCTMNVHIIRKKE

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02362
PF02362
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Nucleotide Sequence
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CGTCAATCCAAGCTCTTGGCCTCTC...

GRMZM2G088413_T01 from maize genome v3


Related TFome: pUT4671

Amino Acid Sequence
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MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLVIPVKFAKNFRGKIERSITLESLGGCTFDVQVAQNLGRIV
FQSGWESFVSAHDLKMCDLLVFKYDGMSRMKVLVFDPSGCEKVPPFFVTKNAMSGGRKREGPLDISSSDANLPMKTPETK
KKAWKQRDRSRISIRSSRSLSSSSGGMTASEDDEAHSVPSYVLPRHTSLDTMQKRKVKERLQAICSEIPIYVLVVKNTNI
SGRSRAMVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQFARDNYLQLGDICLFEPLKTKK
CTMNVHIIRKKE

Nucleotide Sequence
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GGCTCAAGCCTCAAGGTACGGTACC...

GRMZM2G088427_T01 from maize genome v3


Related TFome: pUT4672

Amino Acid Sequence
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MRKPSNGCKERDVIYHRNDHTDDNGKHFFKILIGDFHKRLVIPVKFAKKFRGKVERNIKLESLGGYTFDVQVAQNLGRIM
FQSGWKSFVSAHDLKMFDLLVFKYDGMSRMKVLIFDPSGCEKVPPFFVTKNAMSGGRKREEPQEPLDISSSYADLPMKTP
ETKKKARKQRDRSRINISPCRSISNSSGGMRSSEDDEAHSVPSCILPRGTILDSMQRRKVKERLRAICSEIPIYVFVVKK
SNIFGRSQDMVFSRKYPDVCLPFKSGAVILQCHGKSWEVILEVRKDQGESKRLRIGWAEFARDNNLQLGDICLFEPLKTM
KYTMNVHIVRRRVRSGK

Nucleotide Sequence
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CTATTGCAAACTTTATTGCAGGTAC...

Zm00001d033314_T001 from maize genome v4

Amino Acid Sequence
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MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLVSNFLACGILECGHYLLKSEETFVTNVRRMKMVLVFDPSG
CEKVPPFFVTKNAMSGGRKREGPLDISSSDANLPMKTPETKKKAWKQRDRRGMTASEDDEAHSVPSYVLPRHTSLDTMQK
RKVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQFARDNYLQLGDICLFEPLKTKKCTMNV
HIIRKKEYCTKMRKPSNGCKERDVIYHRNDHTDDNGKHFFKILIGDFHKRLVIPVKFAKKFRGKVERNIKLESLGGYTFD
VQVAQNLGRIMFQSGWKSFVSAHDLKMFDLLVFKYDGMSRMKVLIFDPSGCEKVPPFFVTKNAMSGGRKREEPQEPLDIS
SSYADLPMKTPETKKKARKQRDRRGMRSSEDDEAHSVPSCILPRGTILDSMQRRKVKERLRAICSEIPIYVFVVKKSNIF
GRSQDMVFSRKYPDVCLPFKSGAVILQCHGKSWEVILEVRKDQGESKRLRIGWAEFARDNNLQLGDICLFEPLKTMKYTM
NVHIVRRRVRSGK

Nucleotide Sequence
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ATGAGAAAGCCTTCAAAGGGACGCA...

Zm00001eb051340_T001 from maize genome v5

Amino Acid Sequence
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MRKPSNGCKERDVIYHRNDHTDDNGKHFFKILIGDFHKRLVIPVKFAKKFRGKVERNIKLESLGGYTFDVQVAQNLGRIM
FQSGWKSFVSAHDLKMFDLLVFKYDGMSRMKVLIFDPSGCEKVPPFFVTKNAMSGGRKREEPQEPLDISSSYADLPMKTP
ETKKKARKQRDRSRINISPCRSISNSSGGMRSSEDDEAHSVPSCILPRGTILDSMQRRKVKERLRAICSEIPIYVFVVKK
SNIFGRSQDMVFSRKYPDVCLPFKSGAVILQCHGKSWEVILEVRKDQGESKRLRIGWAEFARDNNLQLGDICLFEPLKTM
KYTMNVHIVRRRVRSGK

Nucleotide Sequence
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CTCTTGGCTTCTCCTATCCCATTCT...

Zm00001eb051340_T002 from maize genome v5

Amino Acid Sequence
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MRKPSNGCKERDVIYHRNDHTDDNGKHFFKILIGDFHKRLVIPVKFAKKFRGKVERNIKLESLGGYTFDVQVAQNLGRIM
FQSGWKSFVSAHDLKMFDLLVFKYDGMSRMKVLIFDPSGCEKVPPFFVTKNAMSGGRKREEPQEPLDISSSYADLPMKTP
ETKKKARKQRDRSRINISPCRSISNSSGGMRSSEDDEAHSVPSCILPRGTILDSMQRRKVKERLRAICSEIPIYVFVVKK
SNIFGRSQDMVFSRKYPDVCLPFKSGAVILQCHGKSWEVILEVRKDQGESKRLRIGWAEFARDNNLQLGDICLFEPLKTM
KYTMNVHIVRRRVRSGK

Nucleotide Sequence
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GGTTTTCTTGTCCTTTGGTTCCTTG...

Zm00001eb051350_T001 from maize genome v5

Amino Acid Sequence
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MRKPSKGRKERDVIYHRNDHSDDRGKHFFKILIGEFHERLVIPVKFAKNFRGKIERSITLESLGGCTFDVQVAQNLGRIV
FQSGWESFVSAHDLKMCDLLVFKYDGMSRMKVLVFDPSGCEKVPPFFVTKNAMSGGRKREGPLDISSSDANLPMKTPETK
KKAWKQRDRSRISIRSSRSLSSSSGGMTASEDDEAHSVPSYVLPRHTSLDTMQKRKVKERLQAICSEIPIYVLVVKNTNI
SGRSRAMVFSRKYPDVCLPSKSGALILQCHGKSWQVMYCIEVWKDRGESKRLRNGWAQFARDNYLQLGDICLFEPLKTKK
CTMNVHIIRKKE

Nucleotide Sequence
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AAAAACGTCAATCCAAGCTCTTGGC...


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